If you had 1,500 base pair pieces of random DNA and you
have to know how many of them had homology to known genes,
what would you do to determine that?



If you had 1,500 base pair pieces of random DNA and you have to know how many of them had homology..

Answer / tina

I would use a BLASTX search against a known protein
database - such MCBI's NR database. I would then sort them
to determine how many were unique.

Is This Answer Correct ?    0 Yes 1 No

Post New Answer

More Bio Informatics Interview Questions

How to find patterns in noisy data?

1 Answers  


In a balanced chemical equation (a) Atoms are conserved (b) Molecules are conserved (c) Moles are conserved (d) Reactant and product molecules are preserved.

1 Answers   Wipro,


What is the criteria for LTQ (LC-MS/MS) SEQUEST search?

1 Answers  


what is e value?

4 Answers  


Suppose the Blast search returned 100 hits. Of these, 17 were false positives and we knew that there were 165 sequences in the database which should have returned a hit with our sequence. How many false negatives were there, and what is the sensitivity and selectivity of Blast in this instance?

1 Answers  


An electron emits energy (a) Because its in orbit (b) When it jumps from one energy level to another (c) Electrons are attracted towards the nucleus (d) The electrostatic force is insufficient to hold the electrons in orbits.

1 Answers   Wipro,


How many grams of NaOH will react with 0.2 equivalent of HCl?

1 Answers  


it is a common experience that if we go on burping simultaneously and consciously(i.e.purposely,as in a non- natural action),our stomach starts aching.Why does this happen?

1 Answers  


If cos2A + cos2B + cos2C = 1 then ABC is a (a) Right angle triangle (b) Equilateral triangle (c) All the angles are acute (d) None of these

1 Answers   Wipro,


A constant voltage is applied between the 2 ends of a uniform metallic wire. Some heat is developed in it. The heat developed is doubled if (a) both the length and radius of the wire are halved. (b) both the length and radius of the wire are doubled (c) the radius of the wire is doubled (d) the length of the wire is doubled.

1 Answers   Wipro,


A man speaks the truth 3 out of 4 times. He throws a die and reports it to be a 6. What is the probability of it being a 6?

2 Answers   Wipro,


What is Far Western Screening ?

1 Answers  


Categories