Interested to Buy Any Domain ? << Click Here >> for more details...
How to predict the structure of a sequence?
- 2 Answers
- 4167 Views
- I also Faced
- E-Mail Answers
Answers were Sorted based on User's Feedback
Answer / guest
1. Retrieve the target sequence from NCBI.
2. Perform BLAST program with pdb database and obtain
homologous sequences
3. Retrieve the template structure from the PDB for the
hypothetical protein resulted from BLAST for target
sequence
4. using swiss-pdb align both the target and template
sequences
5. in the swiss-pdb page , using three modes of alignment
align and fit the sequences
| Is This Answer Correct ? | 2 Yes | 0 No |
Answer / guest
1. Retrieve the target sequence from NCBI.
2. Perform BLAST program with pdb database and obtain
homologous sequences
3. Retrieve the template structure from the PDB for the
hypothetical protein resulted from BLAST for target
sequence
4. using swiss-pdb align both the target and template
sequences
5. in the swiss-pdb page , using three modes of alignment
align and fit the sequences
| Is This Answer Correct ? | 1 Yes | 0 No |
Did integral membrane transport proteins arise as an independent protein class or from other types of proteins?
What is an ontology?
What are the main signals used for gene finding in prokaryotic genomes? How are these signals introduced into the search algorithms?
What is PatternHunter?
What are the main differences between parsimony,distance and likelihood-based algorithms?
Suppose you used the NCBI Blast server to look for a match to a fruit-fly gene. Suppose further that the best alignment contained this section of an alignment: Hit from database: XXXXXXXXXXXXXXNFSTSQ User sequence: SLEAEAAPASISPSNFSSSQ What do the Xs signify?
What is Pharmacogenetics?
How to predict the function of a gene (product)?
what is a qi number?
Tell us about three kinds of DNA?
How many bonds are present in CO2 molecule?
What is a homologue?
Micro Biology 
