Suppose you used the NCBI Blast server to look for a match
to a fruit-fly gene.
Suppose further that the best alignment contained this
section of an alignment:
Hit from database: XXXXXXXXXXXXXXNFSTSQ
user sequence: SLEAEAAPASISPSNFSSSQ
What do the Xs signify?
Answer Posted / swapnil
that x may be any amino acid and we can consider any value
of identity on the basis of matching of user seq with hit
Is This Answer Correct ? | 3 Yes | 0 No |
Post New Answer View All Answers
Does multidrug resistance (mdr) arise by activation of stable genes encoding drug efflux pumps or by mutations of genes encoding other types of transporters in bacterial pathogens?
Why do you think that bioinformatics is important?
What is a DNA array?
What is the idea behind ?weighting? sequences in the package CLUSTAL W for multiple alignment? How are these weights calculated?
Did bacteria, archaea, and eukaryotes exchange transporter genes appreciably during the past two billion years?
How to find flanking region ?
How do you customize database for blast?
Suppose you used the NCBI Blast server to look for a match to a fruit-fly gene. Suppose further that the best alignment contained this section of an alignment: Hit from database: XXXXXXXXXXXXXXNFSTSQ User sequence: SLEAEAAPASISPSNFSSSQ What do the Xs signify?
How to find a sequence of dna molecule?
Is there is best online Training for Bioinformatics
How will you value a biotech company as opposed to a consumer products company?
Describe the aim of microarray data analysis?
What are the current challenges in the Pharmaceutical and biotechnology sectors?
Define perl and clustalW problem?
Can independent origins be established for two families of transport systems having no sequence or motif similarities without three-dimensional structural data?